extract_intensity_size

FeatureExtractor.extract_intensity_size(force=False, fname='features.h5ad')[source]

Calculate per cluster mean intensity and size for each object.

Saves adata in {exp.full_path}/aggregated/full_data/data_dir/{fname}

Parameters
  • force (bool) – Overwrite existing adata.

  • fname (str) – Name of the saved adata.

Return type

None