campa.pl.plot_intensity_change

plot_intensity_change(adata, color_values, size_values, p_values, p_values_data, group_size, marker_dict, groupby, plot_data, alpha, adjust_height=True, ax=None, figsize=(10, 3), save=None, **kwargs)

Plot mean intensity differences between perturbations or clusters.

Takes returns of get_intensity_change() as input: plot_intensity_change(**get_intensity_change(...))

Parameters

• adjust_height (bool) – Option to make plots a bit more streamlined.

• ax (Optional[Axes]) – Axis to plot in.

• figsize (Iterable[int]) – Size of figure.

• save (Optional[str]) – Path to save figure to.

• kwargs (Any) – Keyword arguments for sc.pl.dotplot().

Return type

None