campa
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Contents
Installation
Overview
API
Classes
campa.constants.CAMPAConfig
campa.data.MPPData
MPPData
center_mpp
conditions
has_neighbor_data
latent
mpp
obj_ids
unique_obj_ids
x
y
channels
metadata
MPPData.metadata
add_conditions
add_data_from_dir
add_neighborhood
apply_mask
concat
copy
data
extract_csv
from_data_dir
get_adata
get_channel_ids
get_condition
get_img
get_object_img
get_object_imgs
normalise
prepare
subsample
subset
subset_channels
train_val_test_split
write
campa.data.NNDataset
campa.tl.Experiment
campa.tl.Estimator
campa.tl.Predictor
campa.tl.ModelComparator
campa.tl.Cluster
campa.tl.FeatureExtractor
campa.tl.BaseAEModel
campa.tl.VAEModel
campa.tl.ModelEnum
campa.tl.LossEnum
CLI
Tutorials
campa
Classes
campa.data.MPPData
metadata
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metadata
MPPData.
metadata
:
DataFrame
Object (cell) level metadata (e.g. perturbation, cell-cycle, etc).